PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID NNU_013102-RA
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Proteales; Nelumbonaceae; Nelumbo
Family WRKY
Protein Properties Length: 629aa    MW: 69491.9 Da    PI: 7.7533
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
NNU_013102-RAgenomeCASView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY92.92.4e-29182241159
                    ---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
           WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                    ++Dgy+WrKYGqK+ ++++ pr+Y++C++a +Cpvkkkv+rsaed +v++ tYegeHnh+
  NNU_013102-RA 182 VKDGYQWRKYGQKVTRDNPSPRAYFKCSFApSCPVKKKVQRSAEDRSVLVATYEGEHNHP 241
                    58***************************99****************************8 PP

2WRKY91.18.6e-29476535159
                    ---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
           WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                    ++Dgy+WrKYGqK  k+++ pr+Y+rC++  gCpvkkkv+r+ ed +v++ tYegeHnhe
  NNU_013102-RA 476 VKDGYQWRKYGQKITKDNPSPRAYFRCSMFpGCPVKKKVQRCLEDSSVLVATYEGEHNHE 535
                    58**************************988****************************8 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.801.3E-28174243IPR003657WRKY domain
PROSITE profilePS5081126.704177243IPR003657WRKY domain
SuperFamilySSF1182906.8E-25179243IPR003657WRKY domain
SMARTSM007743.1E-33182242IPR003657WRKY domain
PfamPF031065.9E-24183241IPR003657WRKY domain
Gene3DG3DSA:2.20.25.803.8E-29469535IPR003657WRKY domain
PROSITE profilePS5081125.935471537IPR003657WRKY domain
SuperFamilySSF1182903.14E-25474536IPR003657WRKY domain
SMARTSM007741.5E-34476536IPR003657WRKY domain
PfamPF031062.2E-24477535IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009617Biological Processresponse to bacterium
GO:0009620Biological Processresponse to fungus
GO:0009751Biological Processresponse to salicylic acid
GO:0010200Biological Processresponse to chitin
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 629 aa     Download sequence    Send to blast
MPAIDQFSPQ SVDSFSISTK AAAAAAAAMD STWLDTSLSF GLNVNPHQVT GESLKRELYT  60
DFLDLGRNHS VNQEAGELVE KLNQMSAENK KLTQLLTVMC ENYTTLQTQL KDLMSKNNET  120
GFTVSKKRKA ESMDNNNHNG VSGPTESTSS DEDSGKRIRE DIKTKISRVY VRTDASDTSL  180
VVKDGYQWRK YGQKVTRDNP SPRAYFKCSF APSCPVKKKV QRSAEDRSVL VATYEGEHNH  240
PHPSQAEGSL GSSHGVTLGS IPCSASIISS YSSGPTITLD LTQPGLGLTQ PGLGNNNVKK  300
PNEEVKSPAF QQFLVEQMAS SLTKDPSFTA ALAAAISGKI QQNSLVQKWE LPFNVCFPFI  360
SLLSTSTTHS PETMDAQPDI SQSHREKVQY LQEEIERLQK ENKNLSLLLE LIDRNYNSLR  420
AQLQLNKQIQ QRGCVAPTES CSSQDDSNKR AKIEIPRPKA SQVLFRTDSK DASLVVKDGY  480
QWRKYGQKIT KDNPSPRAYF RCSMFPGCPV KKKVQRCLED SSVLVATYEG EHNHEPEAHH  540
VSSSLTNGSM IVSITNFLPQ TSIDPVAPKV TLDLTLSGAN QEMKETHQRF VEDSNKNKVE  600
EYVASLTKDP SFTAALAAAV ARSFTQFPS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A8e-201815351374WRKY transcription factor 1
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010265617.10.0PREDICTED: probable WRKY transcription factor 40
SwissprotQ9SAH73e-85WRK40_ARATH; Probable WRKY transcription factor 40
TrEMBLA0A140H8T31e-118A0A140H8T3_MANES; WRKY transcription factor 79
STRINGVIT_09s0018g00240.t011e-109(Vitis vinifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G80840.11e-80WRKY DNA-binding protein 40